Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924987.1_cds_XP_016473260.1_65404
CDS Infomation

[gene=LOC107795189] [db_xref=GeneID:107795189] [protein=probable copper-transporting ATPase HMA5] [partial=3'] [protein_id=XP_016473260.1] [location=complement(join(<4..201,1259..1426,1508..1979,2067..2812,3669..3926))] [gbkey=CDS]
Sequence

ATGGAAGCTAACGGGAAGGACGACTTAAAGAAACCGCTTTTGCAAGATGCTGATGCTGTA
GCTGTCAATATGGCTCAACTAAGTGATAGTAGAAATAAAAAGATTAGAACTCTTCTTTTC
AAAGTTAATGGCATCACTTGTGCATCTTGTTCGAATTCCATAGAATCTGCGCTGGGAAAG
CTTAAGGGGATTGAGAGTGCTACGGTGTCTCCACTTCAAGGACAGGCCGTTGTTAAATAT
GTGCCAGAACTTATCAGTGCAAAAAAGATAAAAGAGGCAGTCGAAGACACTGGTTTTGAA
GTTGATGAGTTTCCAGAGCAAGACATTGCTATCTGCCGGATCAGAATCAAGGGGATGGCA
TGCACAAGCTGTTCTGAGTCTGTTGAACGTGCCCTTTCGATGACTGATGGAGTAAAGAAA
GCCGTGGTTGGTTTATCTCTTGAAGAAGCAAAAGTTCATTTTGATCCAAATGTTACCAGT
ACCAGCCGGATTGTTGAAGTAATAGAAGATGCTGGATTTGGAGCTGATATAATTAGTTCA
GGCAGCGATTTAAATAAAGTACACTTCAAGCTAGAAGGCATCAATTCTCCAGATGATTTT
ACTGTTATTCAATGCTGTCTCGAGGCGCTGGAAGGTGTAAACACTGTTGAAATAAACCAG
CAAGAGTATAGAGTGACCATAAGTTATGAACCAGATATAATTGGTCCAAGAACCCTAATG
CATTGTATTCAAGAAGCTGGGCATGGGTCGAGTACTTATCGTGCAAGCCTTTATATCCCA
CCAAGACAGCGAGAATTAGAGAAAGAGCATGAAATCCACACTTATAGGAACCTGTTTTTG
TGGAGCTGCTTATTTTCAGTGCCAATATTTGTTTTCTCAATGGTGCTTCCAATGCTTCCC
CCTTATGGGAATTGGTTAGAGTATAAGGTTTTCAACATGCTTACTGTTGGATTATTGTTA
AAATGGATCCTTTGCACTCCTGTGCAGTTTGTTATTGGTCGAAGGTTTTATGCAGGATCA
TATCATGCACTGAGACGGAAATCTGCAAACATGGATGTTCTGATTGCATTGGGCACTAAT
GCTGCCTATTTCTATTCGGTTTATATTATGATAAAAGCATTGATTTCAAATTCCTTCGAG
GGGCAAGATTTCTTTGAGACTAGTCCAATGTTGATATCGTTTATATTATTGGGGAAATAC
CTAGAAGTTCTTGCAAAAGGAAAGACGTCAGATGCTTTGGCAAAGTTGACAGAGCTGGCT
CCTGAGACTGCTTACCTATTAACATTGGATGGTGCTGGGAATATTATTTCTGAGACAGAA
ATTAGCAGTCAATTAATACAAAAGAATGATGTACTTAAGATTGTTCCGGGGGCAAAGGTT
CCTGTAGATGGCGTTGTTATTAATGGTCACAGTTATGTGAATGAGAGTATGATCACTGGA
GAAGCTAGGCCTGTTTCCAAGATGCCGGGTGATAAGGTCATTGGTGGAACTGTAAATGAG
AATGGATGTGTACTCATCAAAGCCACTCATATTGGTTCGGAGACTGCACTCTCACAAATT
GTTCAGTTAGTTGAAGCTGCTCAGCTTGCCAGAGCACCTGTTCAGAAACTTGCTGATCAG
ATATCGAGATTTTTTGTACCCACGGTTGTTTTAGCTGCAGTCATGACATGGCTGGCGTGG
TTTATCCCTGGAGAAGTAGGTGTATATCCTTCAAGTTGGATACCAAAAGGAATGAGTGTA
TTTGAGCTTGCATTGCAGTTTGGTATATCGGTATTGGTGGTTGCTTGCCCCTGTGCTCTC
GGATTAGCTACTCCTACAGCAATTATGGTTGCCACCGGAAAG

Peptide Sequence

PEP ID

XP_016473260.1
PEP Infomation

PREDICTED: probable copper-transporting ATPase HMA5, partial [Nicotiana tabacum]
Sequence

MEANGKDDLKKPLLQDADAVAVNMAQLSDSRNKKIRTLLFKVNGITCASCSNSIESALGK
LKGIESATVSPLQGQAVVKYVPELISAKKIKEAVEDTGFEVDEFPEQDIAICRIRIKGMA
CTSCSESVERALSMTDGVKKAVVGLSLEEAKVHFDPNVTSTSRIVEVIEDAGFGADIISS
GSDLNKVHFKLEGINSPDDFTVIQCCLEALEGVNTVEINQQEYRVTISYEPDIIGPRTLM
HCIQEAGHGSSTYRASLYIPPRQRELEKEHEIHTYRNLFLWSCLFSVPIFVFSMVLPMLP
PYGNWLEYKVFNMLTVGLLLKWILCTPVQFVIGRRFYAGSYHALRRKSANMDVLIALGTN
AAYFYSVYIMIKALISNSFEGQDFFETSPMLISFILLGKYLEVLAKGKTSDALAKLTELA
PETAYLLTLDGAGNIISETEISSQLIQKNDVLKIVPGAKVPVDGVVINGHSYVNESMITG
EARPVSKMPGDKVIGGTVNENGCVLIKATHIGSETALSQIVQLVEAAQLARAPVQKLADQ
ISRFFVPTVVLAAVMTWLAWFIPGEVGVYPSSWIPKGMSVFELALQFGISVLVVACPCAL
GLATPTAIMVATGK

Transcript Sequence

Gene sequence data has not been registered.